Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGTCGCAGTCTGCAGT
(((((((((((..((((((((&)))))))).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199381
GeneSymbolRNF145
Binding site8,30
Score1.0
Seed1
Au0.492
Energy-26.9
Binding len22
Me-8.574
Phylopstem4.958609999999999
Phylopflank2.7189009285714283
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
Position5UTR
2D Structure