Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATAACCTTGCTAAATCTGCAT
.(((((..(((((((((((((&)))))))))))..)).....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199382
GeneSymbolRNF145
Binding site791,817
Score1.0
Seed0
Au0.618
Energy-21.3
Binding len26
Me-7.651
Phylopstem0.6201544133333333
Phylopflank0.6315871215000002
Longest consecutive pairings11
Position of longest consecutive pairings15
Pairings in 3prime end8
PositionCDS
2D Structure