Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGGGTGCATTCATGTAAT
(((((..((((.(((((((((&))))))))).))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199382
GeneSymbolRNF145
Binding site2834,2858
Score0.846
Seed0
Au0.485
Energy-20.2
Binding len24
Me-10.729
Phylopstem5.82577111111111
Phylopflank5.553409821250001
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure