Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTGGCCGCCGTCCTGAGCCTGCAGCTGGCTGCAGC
(((((((..(((((((.((((&.)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001356372
GeneSymbolSLURP2
Binding site42,81
Score0.923
Seed1
Au0.324
Energy-22.9
Binding len20
Me-7.308
Phylopstem-0.5726622428571428
Phylopflank-0.22470669462837836
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure