Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGGCCACAGCTGCC
..(((((((.((((...((((&))))..)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199455
GeneSymbolBRD2
Binding site4112,4131
Score1.0
Seed1
Au0.471
Energy-23.9
Binding len19
Me-7.168
Phylopstem0.7236710000000001
Phylopflank1.3229130175000006
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure