Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCACTCTGCTGGACCCCCGCTCCTTGCTGTTACTGCAGCTC
....(((((((((.((((((.&.))))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199456
GeneSymbolBRD2
Binding site774,819
Score0.846
Seed0
Au0.412
Energy-20.8
Binding len21
Me-10.403
Phylopstem1.1113055777777778
Phylopflank1.7931469624999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure