Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGTGCTGTG
..(((((.((((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199463
GeneSymbolPDCD2
Binding site214,228
Score0.923
Seed0
Au0.426
Energy-20.0
Binding len14
Me-7.271
Phylopstem-0.12224227499999998
Phylopflank-0.018588136250000026
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure