Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAATGGCAGG
......((((.((((.(((((&))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199479
GeneSymbolZSCAN9
Binding site259,274
Score0.923
Seed0
Au0.559
Energy-17.3
Binding len15
Me-18.624
Phylopstem-0.3511504
Phylopflank0.018771645000000014
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure