Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCAGAAAGCAGCTCAGAGCTGCAAA
((((((((..((((((.....&.))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001356499
GeneSymbolSEC16B
Binding site1149,1178
Score0.897
Seed1
Au0.471
Energy-19.3
Binding len19
Me-6.236
Phylopstem4.689901125
Phylopflank2.9552911437499993
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure