Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACGCTTAACTGGTAGTGCCCACAAGCCTGGCAGCTGTAGA
((((((((((((((....(((&.)))....))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199551
GeneSymbolCIDEC
Binding site848,893
Score0.846
Seed1
Au0.368
Energy-22.6
Binding len25
Me-4.906
Phylopstem3.3535113750000005
Phylopflank2.3358542063749983
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure