Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACCCGGCGTGCCAGGA
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001199570
GeneSymbolCLIP3
Binding site468,484
Score0.923
Seed1
Au0.441
Energy-15.0
Binding len10
Me-14.322
Phylopstem0.7589485250000001
Phylopflank0.36339111
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure