Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGTCTGTGACCAGGGCCTGCACCACGGGCAGCCGCAGGTGGGAC
((.((.((((((((((..(((&.)))....)))))))))).)).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199577
GeneSymbolGIMAP1-GIMAP5
Binding site258,306
Score0.846
Seed0
Au0.324
Energy-25.3
Binding len25
Me-7.396
Phylopstem2.244077
Phylopflank0.3363524175
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure