Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTGCAGCCGAGCTCGTT
..((((((.((((((((((((&)))).)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001357
GeneSymbolDHX9
Binding site2455,2476
Score0.846
Seed1
Au0.471
Energy-21.5
Binding len21
Me-6.013
Phylopstem4.1874501384615375
Phylopflank4.924163523500001
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure