Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCTCCCCAGCTGCAGG
(((((((((.((..((.(((.&))).))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199636
GeneSymbolADCYAP1R1
Binding site3188,3208
Score1.0
Seed1
Au0.382
Energy-23.2
Binding len20
Me-7.326
Phylopstem-0.05563255555555556
Phylopflank-0.23055726375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure