Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGCGGCGCCATGTGCAGAAACAGGAGGCCGAGAACCAGCAGCTGGCAGA
((((((((((((((.(..(((&.))).).)))).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199653
GeneSymbolPMF1
Binding site386,439
Score0.923
Seed1
Au0.338
Energy-23.2
Binding len24
Me-4.673
Phylopstem1.7021465625000003
Phylopflank1.28059397125
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure