Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGAACCAGCAGCTGGCAGA
((((((((((((((.(..(((&))).).)))).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199664
GeneSymbolPMF1-BGLAP
Binding site289,312
Score0.846
Seed1
Au0.338
Energy-22.8
Binding len23
Me-4.673
Phylopstem1.2053555624999999
Phylopflank0.9779561275000002
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure