Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACATAGGTAAACGTGTGCCATGGTG
(((((((((((...........&.)))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001199671
GeneSymbolCALU
Binding site6015,6042
Score0.846
Seed1
Au0.588
Energy-16.9
Binding len14
Me-10.399
Phylopstem-0.5727985666666666
Phylopflank-0.19330638125000005
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end0
Position3UTR
2D Structure