Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAAAGCCGCAGCGACAGC
(((..(((((((((...(((.&)))...)))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199692
GeneSymbolSLC4A2
Binding site1010,1031
Score0.846
Seed0
Au0.397
Energy-23.4
Binding len21
Me-12.057
Phylopstem1.3053402222222221
Phylopflank0.9259250412500002
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
Position5UTR
2D Structure