Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAATGCTGCATTGCTGCC
..(((((((((((..(((((.&)))))..))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199699
GeneSymbolDHX33
Binding site5005,5026
Score0.923
Seed1
Au0.515
Energy-21.9
Binding len21
Me-6.549
Phylopstem2.836508076923077
Phylopflank2.2897370525
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure