Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCAGGCAGCCGCATCTGGGGT
((.(((.(((((((((.....&.))))))))).))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001357021
GeneSymbolEGF
Binding site351,374
Score0.923
Seed0
Au0.338
Energy-20.4
Binding len18
Me-7.039
Phylopstem-0.15145645555555554
Phylopflank0.32726494624999997
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end3
Position5UTR
2D Structure