Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCCGAGTAGCTGGAAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199739
GeneSymbolCTSS
Binding site2680,2706
Score0.846
Seed0
Au0.426
Energy-19.7
Binding len26
Me-5.728
Phylopstem0.2124637777777778
Phylopflank-0.14488561874999994
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure