Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGGGGGCGCGGGGG
...((((((.(((((((..((&))..))))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001199746
GeneSymbolHOXD8
Binding site114,132
Score0.846
Seed0
Au0.176
Energy-27.7
Binding len18
Me-7.757
Phylopstem0.8584645714285714
Phylopflank0.9990714725
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure