Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTGCAAGGGGCACCCGGACCCCACACTACCCCAGCCCCAGCGGCTGCAAT
(((((((((((((((...(((&.))).)))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199752
GeneSymbolCPT1C
Binding site1867,1921
Score0.846
Seed1
Au0.338
Energy-25.1
Binding len24
Me-4.171
Phylopstem2.0535292333333337
Phylopflank2.4416665350000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure