Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTCTTAACTTGCAGTTGTG
..(((((((((((((..((((&))))..))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199756
GeneSymbolPPP2R5A
Binding site2506,2527
Score0.846
Seed1
Au0.662
Energy-17.2
Binding len21
Me-5.19
Phylopstem2.7250189999999996
Phylopflank3.0685763250000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure