Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGTGCCAGGTG
(((((((((.............&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001199764
GeneSymbolPTPRN
Binding site153,166
Score1.0
Seed1
Au0.382
Energy-16.5
Binding len11
Me-14.466
Phylopstem-0.0508583111111111
Phylopflank-0.2741447775
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure