Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAGCCGTGGCG
.....(((((((((((.(((.&))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199764
GeneSymbolPTPRN
Binding site2859,2875
Score1.0
Seed0
Au0.456
Energy-22.2
Binding len16
Me-13.666
Phylopstem0.48575832727272733
Phylopflank1.757323945
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure