Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCGCCGCTGCTGCT
..(((((.((((.(((.((((&)))).))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199770
GeneSymbolOTX1
Binding site1560,1579
Score0.827
Seed0
Au0.426
Energy-24.9
Binding len19
Me-8.56
Phylopstem1.66665
Phylopflank4.912763007999999
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure