Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTAATGCTGTGTGCCCATGGA
.((.((((((((...(((((((&)))))))....))))))))...)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001199774
GeneSymbolPSMA5
Binding site1713,1738
Score0.923
Seed0
Au0.603
Energy-18.8
Binding len25
Me-9.707
Phylopstem0.38408651250000003
Phylopflank0.2687466125
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure