Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTGTTGTTGCCAGAAATGCACTTGTGCCAGGTA
((((((((((...((((..(((&.)))..))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001199775
GeneSymbolCPD
Binding site6533,6569
Score0.923
Seed1
Au0.574
Energy-18.8
Binding len23
Me-11.398
Phylopstem0.5313386
Phylopflank0.7436377175000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure