Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGGCTGGAGTACAGTGGCACGATCGTAGCTTACTGCAGT
((((((((((((((((.....&.))))))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199780
GeneSymbolPSMB2
Binding site3639,3682
Score0.923
Seed1
Au0.485
Energy-19.6
Binding len22
Me-3.938
Phylopstem1.1190098499999999
Phylopflank1.49123896
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure