Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGGGCCGCCGTTGTTGTAGT
(((((((.(((((.((..(((&)))..)).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199781
GeneSymbolPOC1B-GALNT4
Binding site1,23
Score0.846
Seed1
Au0.308
Energy-18.3
Binding len22
Me-7.108
Phylopstem0.5800087142857143
Phylopflank0.7854495625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure