Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTTGCATTGAAGGCCGGT
..(((((...((((((((((((&))))))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001357857
GeneSymbolATXN1
Binding site3351,3372
Score1.0
Seed0
Au0.515
Energy-20.0
Binding len21
Me-9.57
Phylopstem0.7319305066666667
Phylopflank1.3692283755
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure