Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGGAGGGAAGGAGCCAGG
..(((((((((((((...(((.&.)))..))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001357857
GeneSymbolATXN1
Binding site6276,6296
Score1.0
Seed1
Au0.338
Energy-26.3
Binding len20
Me-5.19
Phylopstem1.0818581
Phylopflank1.5051544612499996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure