Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGACCGGAGCGGTAGG
((((.(((.(((((((.....&))))))).))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199823
GeneSymbolNEDD8-MDP1
Binding site42,59
Score0.846
Seed0
Au0.353
Energy-20.0
Binding len17
Me-9.113
Phylopstem1.0338467142857142
Phylopflank0.22689195968750003
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end3
Position5UTR
2D Structure