Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCGACCCGGTCTGCAGC
(((((((((.(((((.((((.&)))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199824
GeneSymbolSBK3
Binding site511,531
Score1.0
Seed1
Au0.368
Energy-20.2
Binding len20
Me-5.413
Phylopstem1.3938746000000002
Phylopflank1.4762748937499999
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure