Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCACCCCACCCCCTCAGCCTCAGCAGCAGCAGG
((((.(((((((.((((((((&)))))))).))................))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199828
GeneSymbolSPRR1A
Binding site101,139
Score0.923
Seed0
Au0.353
Energy-23.0
Binding len38
Me-9.346
Phylopstem1.40189375
Phylopflank1.4259300035
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end8
PositionCDS
2D Structure