Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTACACAGTTAGTGAAATGGATGCTAGGA
.((((((((((..(((((((((&)))))))))..))...........)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001199829
GeneSymbolHORMAD1
Binding site344,377
Score0.923
Seed1
Au0.632
Energy-19.1
Binding len33
Me-8.429
Phylopstem-0.01728910571428569
Phylopflank0.25481339974999995
Longest consecutive pairings9
Position of longest consecutive pairings24
Pairings in 3prime end8
PositionCDS
2D Structure