Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATGATGGCTGTAGCTGTT
..((((((((((((((...((&))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199830
GeneSymbolHPSE
Binding site3433,3453
Score0.808
Seed1
Au0.515
Energy-20.1
Binding len20
Me-4.957
Phylopstem3.6975595
Phylopflank4.2754466424999995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure