Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATAACTGTCTGTT
..((((..(((((((((((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199830
GeneSymbolHPSE
Binding site3181,3199
Score0.923
Seed0
Au0.676
Energy-20.1
Binding len18
Me-8.814
Phylopstem2.9608096076923074
Phylopflank2.8204324537499996
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure