Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGCGGCCAGCAGCAAGCAAT
((((.(((((((((((.((((&))))..)))))).)))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001357857
GeneSymbolATXN1
Binding site2331,2356
Score0.846
Seed0
Au0.324
Energy-24.4
Binding len25
Me-8.057
Phylopstem2.087078175
Phylopflank2.1146533512500008
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure