Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTAGCCTTCTTTGTCTTTGGGGCTGCAC
.(((((((.((((((((((((&)))))))))))............).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199864
GeneSymbolBCL2L2-PABPN1
Binding site441,474
Score0.846
Seed1
Au0.441
Energy-23.0
Binding len33
Me-4.85
Phylopstem4.432224166666667
Phylopflank4.7246331375
Longest consecutive pairings11
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure