Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTCTGATCTGGCGGCTCAGCTGCAT
.((((((((.((((((.((((&.)))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199864
GeneSymbolBCL2L2-PABPN1
Binding site335,365
Score0.923
Seed1
Au0.382
Energy-23.2
Binding len21
Me-5.036
Phylopstem1.735513
Phylopflank3.5568167175000007
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure