Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAATGCAAACCAGCTGCAAA
(((((((((.(..((((.(((&)))..))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199866
GeneSymbolKIF16B
Binding site3053,3075
Score0.846
Seed1
Au0.485
Energy-21.8
Binding len22
Me-9.816
Phylopstem4.827333333333333
Phylopflank4.6626148625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure