Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCTTCTTGCAGCGCCAGCAGCTTGCT
..((((((((((((((((((.&.)))))))..))).)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199873
GeneSymbolB4GALT3
Binding site1163,1192
Score0.846
Seed1
Au0.426
Energy-22.7
Binding len24
Me-4.957
Phylopstem4.8827808818181815
Phylopflank4.3080396825000005
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure