Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGATCTGCATGCGGAGCTTCAGCCGCAGCG
.....((((((((((.(((.(&.).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199880
GeneSymbolEGR3
Binding site828,861
Score1.0
Seed0
Au0.382
Energy-22.1
Binding len17
Me-13.899
Phylopstem2.8215939999999997
Phylopflank1.0779897000749998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure