Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGTCGCGGCGTGGGTAAGAGGAACCAGCTGCAGA
(((((((((((((((((....&)))))))))...................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199886
GeneSymbolIL7
Binding site376,413
Score0.846
Seed1
Au0.397
Energy-18.4
Binding len37
Me-3.938
Phylopstem-0.009619944444444433
Phylopflank0.2899413299999999
Longest consecutive pairings9
Position of longest consecutive pairings28
Pairings in 3prime end4
Position5UTR
2D Structure