Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTCCAATCTCGTAGCTGCC
..(((((((((((((.(((((&)))))..))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199898
GeneSymbolPDK2
Binding site3253,3276
Score1.0
Seed1
Au0.382
Energy-22.6
Binding len23
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure