Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCGACGGGGCTGCT
..((((((.(.((((..((((&))))..))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199899
GeneSymbolPDK2
Binding site26,45
Score1.0
Seed1
Au0.338
Energy-21.8
Binding len19
Me-9.071
Phylopstem0.2569406666666667
Phylopflank-0.022547969142857067
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure