Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTGGGCCGCACGTTGCAC
.(((((((((((((.......&.))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199917
GeneSymbolPGM3
Binding site5290,5311
Score0.846
Seed1
Au0.544
Energy-19.6
Binding len16
Me-4.762
Phylopstem1.0866640714285711
Phylopflank3.917140775
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end1
Position3UTR
2D Structure