Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCGCAGGCATGGCTGCGGTTGTGG
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001358263
GeneSymbolHK1
Binding site2999,3024
Score0.923
Seed1
Au0.382
Energy-18.7
Binding len16
Me-4.957
Phylopstem6.218614228571428
Phylopflank4.262803285
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure